Feature identity
- Identifier
- Pa02g3088
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 4,998 bp
- Genomic location
- Pa02:77,307,818–77,312,815
- Strand
- +
West Indian T2T · gene
Pa02g3088
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,998
- bp
- Pa02:77,307,818–77,312,815
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104595241 | Seed ortholog: 337451.A0A443N5Q9 | COG: S | eggNOG OG: ArfGap@131567|A-1*, ArfGap@2759|Cf-9, ArfGap@3398|AeS-22, ArfGap@35493|sF-18
- Gene Ontology
- GO:0001675 acrosome assembly; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005930 axoneme; GO:0005935 cellular bud neck; GO:0005938 cell cortex; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006897 endocytosis; GO:0007289 spermatid nucleus differentiation; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0010512 negative regulation of phosphatidylinositol biosynthetic process; GO:0016020 membrane; GO:0030437 ascospore formation; GO:0030479 actin cortical patch; GO:0031410 cytoplasmic vesicle; GO:0043025 neuronal cell body; GO:0045109 intermediate filament organization; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K12486, K12493, K15044, K17969, K20474 | Pathway: 04137, 04144 | BRITE: 00001, 03019, 03029, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa02g3088.1
part_ofgenePa02g3088
