Feature identity
- Identifier
- PaHa05g18320.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,260 bp
- Genomic location
- 5:57,132,273–57,140,858
- Strand
- −
Hass · mRNA
PaHa05g18320.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,260
- bp
- 5:57,132,273–57,140,858
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g18320
- eggNOG
- Preferred name: FATB1 | Seed ortholog: 337451.A0A443NWY0 | COG: S | eggNOG OG: Acyl-ACP_TE@131567|A-1, Acyl-ACP_TE@3193|AKG-21, Acyl-ACP_TE@3398|Aqf-25, Acyl-ACP_TE@35493|tf-19, Acyl-thio_N@3398|A-1
- Gene Ontology
- GO:0000036 acyl carrier activity; GO:0006633 fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009536 plastid; GO:0016297 fatty acyl-[ACP] hydrolase activity
- KEGG
- EC: ec:3.1.2.14, ec:3.1.2.21 | KO: K10781 | Pathway: 00061, 01100, 01212 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g18320.1-protein
derives_frommRNAPaHa05g18320.1
mRNAPaHa05g18320.1
part_ofgenePaHa05g18320
CDS
part_ofPaHa05g18320.1-CDS-5-1787993825:57132273..57132545mRNAPaHa05g18320.1
CDS
part_ofPaHa05g18320.1-CDS-5-1787993825:57136976..57137044mRNAPaHa05g18320.1
CDS
part_ofPaHa05g18320.1-CDS-5-1787993825:57137160..57137331mRNAPaHa05g18320.1
CDS
part_ofPaHa05g18320.1-CDS-5-1787993825:57137499..57137612mRNAPaHa05g18320.1
CDS
part_ofPaHa05g18320.1-CDS-5-1787993825:57139739..57139872mRNAPaHa05g18320.1
CDS
part_ofPaHa05g18320.1-CDS-5-1787993825:57140361..57140858mRNAPaHa05g18320.1
exon
part_ofPaHa05g18320.1-exon-5-1787993825:57132273..57132545mRNAPaHa05g18320.1
exon
part_ofPaHa05g18320.1-exon-5-1787993825:57136976..57137044mRNAPaHa05g18320.1
exon
part_ofPaHa05g18320.1-exon-5-1787993825:57137160..57137331mRNAPaHa05g18320.1
exon
part_ofPaHa05g18320.1-exon-5-1787993825:57137499..57137612mRNAPaHa05g18320.1
exon
part_ofPaHa05g18320.1-exon-5-1787993825:57139739..57139872mRNAPaHa05g18320.1
exon
part_ofPaHa05g18320.1-exon-5-1787993825:57140361..57140858mRNAPaHa05g18320.1
