Feature identity
- Identifier
- PaHa05g18310.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 567 bp
- Genomic location
- 5:57,115,458–57,117,659
- Strand
- −
Hass · mRNA
PaHa05g18310.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 567
- bp
- 5:57,115,458–57,117,659
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g18310
- eggNOG
- Preferred name: IAA6 | Seed ortholog: 337451.A0A3S3MG76 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|CX-9, AUX_IAA@3398|Fp-11
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009704 de-etiolation; GO:0009733 response to auxin; GO:0042802 identical protein binding; GO:0080086 stamen filament development
- KEGG
- KO: K14484 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g18310.1-protein
derives_frommRNAPaHa05g18310.1
mRNAPaHa05g18310.1
part_ofgenePaHa05g18310
CDS
part_ofPaHa05g18310.1-CDS-5-1787993825:57115458..57115533mRNAPaHa05g18310.1
CDS
part_ofPaHa05g18310.1-CDS-5-1787993825:57115724..57115820mRNAPaHa05g18310.1
CDS
part_ofPaHa05g18310.1-CDS-5-1787993825:57117266..57117659mRNAPaHa05g18310.1
exon
part_ofPaHa05g18310.1-exon-5-1787993825:57115458..57115533mRNAPaHa05g18310.1
exon
part_ofPaHa05g18310.1-exon-5-1787993825:57115724..57115820mRNAPaHa05g18310.1
exon
part_ofPaHa05g18310.1-exon-5-1787993825:57117266..57117659mRNAPaHa05g18310.1
