Feature identity
- Identifier
- PaHa05g17840.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 507 bp
- Genomic location
- 5:56,266,334–56,269,529
- Strand
- +
Hass · mRNA
PaHa05g17840.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 507
- bp
- 5:56,266,334–56,269,529
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g17840
- eggNOG
- Preferred name: LOC104595406 | Seed ortholog: 337451.A0A3S3N970 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Bl-10
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009944 polarity specification of adaxial/abaxial axis; GO:1902183 regulation of shoot apical meristem development; GO:2000024 regulation of leaf development
- KEGG
- KO: K25796 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g17840.1-protein
derives_frommRNAPaHa05g17840.1
mRNAPaHa05g17840.1
part_ofgenePaHa05g17840
CDS
part_ofPaHa05g17840.1-CDS-5-1787993825:56266334..56266408mRNAPaHa05g17840.1
CDS
part_ofPaHa05g17840.1-CDS-5-1787993825:56267140..56267259mRNAPaHa05g17840.1
CDS
part_ofPaHa05g17840.1-CDS-5-1787993825:56268096..56268213mRNAPaHa05g17840.1
CDS
part_ofPaHa05g17840.1-CDS-5-1787993825:56269167..56269215mRNAPaHa05g17840.1
CDS
part_ofPaHa05g17840.1-CDS-5-1787993825:56269294..56269369mRNAPaHa05g17840.1
CDS
part_ofPaHa05g17840.1-CDS-5-1787993825:56269461..56269529mRNAPaHa05g17840.1
exon
part_ofPaHa05g17840.1-exon-5-1787993825:56266334..56266408mRNAPaHa05g17840.1
exon
part_ofPaHa05g17840.1-exon-5-1787993825:56267140..56267259mRNAPaHa05g17840.1
exon
part_ofPaHa05g17840.1-exon-5-1787993825:56268096..56268213mRNAPaHa05g17840.1
exon
part_ofPaHa05g17840.1-exon-5-1787993825:56269167..56269215mRNAPaHa05g17840.1
exon
part_ofPaHa05g17840.1-exon-5-1787993825:56269294..56269369mRNAPaHa05g17840.1
exon
part_ofPaHa05g17840.1-exon-5-1787993825:56269461..56269529mRNAPaHa05g17840.1
