Feature identity
- Identifier
- PaHa05g17510.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,175 bp
- Genomic location
- 5:55,645,763–55,664,595
- Strand
- −
Hass · mRNA
PaHa05g17510.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,175
- bp
- 5:55,645,763–55,664,595
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g17510
- eggNOG
- Preferred name: LOC104248918 | Seed ortholog: 1590841.A0A2R6R4D4 | COG: COG1250 | eggNOG OG: 3HCDH@131567|LT-12, 3HCDH@1437183|DKw-26, 3HCDH@1437201|FAw-29, 3HCDH@35493|BGo-21, 3HCDH_N@131567|GO-11, 3HCDH_N@1437183|Bzd-25, 3HCDH_N@35493|AgX-21, ECH_1@131567|Bgt-21, ECH_1@1437183|YhL-36, ECH_1@35493|MUu-30
- Gene Ontology
- GO:0003857 (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity; GO:0004300 enoyl-CoA hydratase activity; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005886 plasma membrane; GO:0006635 fatty acid beta-oxidation; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0009695 jasmonic acid biosynthetic process; GO:0009845 seed germination; GO:0009908 flower development; GO:0018812 3-hydroxyacyl-CoA dehydratase activity
- KEGG
- EC: ec:1.1.1.211, ec:1.1.1.35, ec:4.2.1.17 | KO: K10527 | Pathway: 00071, 00592, 01100, 01110, 01212 | Module: M00087, M00113 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g17510.1-protein
derives_frommRNAPaHa05g17510.1
mRNAPaHa05g17510.1
part_ofgenePaHa05g17510
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55645763..55645807mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55648247..55648385mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55652637..55652785mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55652921..55653042mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55653163..55653284mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55654467..55654721mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55655644..55655807mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55655930..55656051mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55656317..55656491mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55658746..55658832mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55659283..55659585mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55660371..55660426mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55660537..55660618mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55660711..55660778mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55661035..55661091mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55661191..55661253mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55664171..55664242mRNAPaHa05g17510.1
CDS
part_ofPaHa05g17510.1-CDS-5-1787993825:55664502..55664595mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55645763..55645807mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55648247..55648385mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55652637..55652785mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55652921..55653042mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55653163..55653284mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55654467..55654721mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55655644..55655807mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55655930..55656051mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55656317..55656491mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55658746..55658832mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55659283..55659585mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55660371..55660426mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55660537..55660618mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55660711..55660778mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55661035..55661091mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55661191..55661253mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55664171..55664242mRNAPaHa05g17510.1
exon
part_ofPaHa05g17510.1-exon-5-1787993825:55664502..55664595mRNAPaHa05g17510.1
