Feature identity
- Identifier
- PaHa05g16780.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 789 bp
- Genomic location
- 5:54,250,127–54,258,052
- Strand
- +
Hass · mRNA
PaHa05g16780.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 789
- bp
- 5:54,250,127–54,258,052
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g16780
- eggNOG
- Preferred name: LOC104601991 | Seed ortholog: 337451.A0A3S3NNA9 | COG: COG3118 | eggNOG OG: Thioredoxin@131567|WE-15!
- Gene Ontology
- GO:0005886 plasma membrane; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009535 chloroplast thylakoid membrane; GO:0010190 cytochrome b6f complex assembly; GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0031977 thylakoid lumen
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g16780.1-protein
derives_frommRNAPaHa05g16780.1
mRNAPaHa05g16780.1
part_ofgenePaHa05g16780
CDS
part_ofPaHa05g16780.1-CDS-5-1787993825:54250127..54250306mRNAPaHa05g16780.1
CDS
part_ofPaHa05g16780.1-CDS-5-1787993825:54254955..54255176mRNAPaHa05g16780.1
CDS
part_ofPaHa05g16780.1-CDS-5-1787993825:54255398..54255501mRNAPaHa05g16780.1
CDS
part_ofPaHa05g16780.1-CDS-5-1787993825:54257770..54258052mRNAPaHa05g16780.1
exon
part_ofPaHa05g16780.1-exon-5-1787993825:54250127..54250306mRNAPaHa05g16780.1
exon
part_ofPaHa05g16780.1-exon-5-1787993825:54254955..54255176mRNAPaHa05g16780.1
exon
part_ofPaHa05g16780.1-exon-5-1787993825:54255398..54255501mRNAPaHa05g16780.1
exon
part_ofPaHa05g16780.1-exon-5-1787993825:54257770..54258052mRNAPaHa05g16780.1
