Feature identity
- Identifier
- PaHa05g15810.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,962 bp
- Genomic location
- 5:52,560,061–52,573,759
- Strand
- −
Hass · mRNA
PaHa05g15810.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,962
- bp
- 5:52,560,061–52,573,759
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g15810
- eggNOG
- Preferred name: WRKY20 | Seed ortholog: 337451.A0A443NXK7 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Uo-17, WRKY@3193|APp-24, WRKY@33090|AAb-22, WRKY@3398|Ahx-26
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K13424, K18835 | Pathway: 04016 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g15810.1-protein
derives_frommRNAPaHa05g15810.1
mRNAPaHa05g15810.1
part_ofgenePaHa05g15810
CDS
part_ofPaHa05g15810.1-CDS-5-1787993825:52560061..52560607mRNAPaHa05g15810.1
CDS
part_ofPaHa05g15810.1-CDS-5-1787993825:52568126..52568284mRNAPaHa05g15810.1
CDS
part_ofPaHa05g15810.1-CDS-5-1787993825:52568744..52568918mRNAPaHa05g15810.1
CDS
part_ofPaHa05g15810.1-CDS-5-1787993825:52569755..52570337mRNAPaHa05g15810.1
CDS
part_ofPaHa05g15810.1-CDS-5-1787993825:52571605..52571799mRNAPaHa05g15810.1
CDS
part_ofPaHa05g15810.1-CDS-5-1787993825:52573457..52573759mRNAPaHa05g15810.1
exon
part_ofPaHa05g15810.1-exon-5-1787993825:52560061..52560607mRNAPaHa05g15810.1
exon
part_ofPaHa05g15810.1-exon-5-1787993825:52568126..52568284mRNAPaHa05g15810.1
exon
part_ofPaHa05g15810.1-exon-5-1787993825:52568744..52568918mRNAPaHa05g15810.1
exon
part_ofPaHa05g15810.1-exon-5-1787993825:52569755..52570337mRNAPaHa05g15810.1
exon
part_ofPaHa05g15810.1-exon-5-1787993825:52571605..52571799mRNAPaHa05g15810.1
exon
part_ofPaHa05g15810.1-exon-5-1787993825:52573457..52573759mRNAPaHa05g15810.1
