Feature identity
- Identifier
- PaHa05g15500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,278 bp
- Genomic location
- 5:51,832,117–51,847,421
- Strand
- +
Hass · mRNA
PaHa05g15500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,278
- bp
- 5:51,832,117–51,847,421
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g15500
- eggNOG
- Preferred name: NAC008 | Seed ortholog: 337451.A0A3S4NYF1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|HY-10, NAM@3398|LV-11, NAM@35493|Z-5
- Gene Ontology
- GO:0000077 DNA damage checkpoint signaling; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010332 response to gamma radiation; GO:0040020 regulation of meiotic nuclear division
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g15500.1-protein
derives_frommRNAPaHa05g15500.1
mRNAPaHa05g15500.1
part_ofgenePaHa05g15500
CDS
part_ofPaHa05g15500.1-CDS-5-1787993825:51832117..51832124mRNAPaHa05g15500.1
CDS
part_ofPaHa05g15500.1-CDS-5-1787993825:51843351..51843492mRNAPaHa05g15500.1
CDS
part_ofPaHa05g15500.1-CDS-5-1787993825:51845477..51845663mRNAPaHa05g15500.1
CDS
part_ofPaHa05g15500.1-CDS-5-1787993825:51845773..51846281mRNAPaHa05g15500.1
CDS
part_ofPaHa05g15500.1-CDS-5-1787993825:51846899..51847264mRNAPaHa05g15500.1
CDS
part_ofPaHa05g15500.1-CDS-5-1787993825:51847356..51847421mRNAPaHa05g15500.1
exon
part_ofPaHa05g15500.1-exon-5-1787993825:51832117..51832124mRNAPaHa05g15500.1
exon
part_ofPaHa05g15500.1-exon-5-1787993825:51843351..51843492mRNAPaHa05g15500.1
exon
part_ofPaHa05g15500.1-exon-5-1787993825:51845477..51845663mRNAPaHa05g15500.1
exon
part_ofPaHa05g15500.1-exon-5-1787993825:51845773..51846281mRNAPaHa05g15500.1
exon
part_ofPaHa05g15500.1-exon-5-1787993825:51846899..51847264mRNAPaHa05g15500.1
exon
part_ofPaHa05g15500.1-exon-5-1787993825:51847356..51847421mRNAPaHa05g15500.1
