Feature identity
- Identifier
- Pa01g3890
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 18,716 bp
- Genomic location
- Pa01:88,300,551–88,319,266
- Strand
- +
West Indian T2T · gene
Pa01g3890
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 18,716
- bp
- Pa01:88,300,551–88,319,266
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC103718763 | Seed ortholog: 337451.A0A443NRH1 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, SAWADEE@131567|A-1*, SAWADEE@2759|G-3, SAWADEE@33090|y-7
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0016514 SWI/SNF complex; GO:0040029 epigenetic regulation of gene expression; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding
- KEGG
- KO: K09326, K09336, K09338, K09339, K09366, K10875 | Pathway: 03440 | BRITE: 00001, 03000, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g3890.1
part_ofgenePa01g3890
