Feature identity
- Identifier
- Pa01g3882
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 6,548 bp
- Genomic location
- Pa01:88,200,294–88,206,841
- Strand
- −
West Indian T2T · gene
Pa01g3882
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 6,548
- bp
- Pa01:88,200,294–88,206,841
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC103720730 | Seed ortholog: 337451.A0A3S3P205 | COG: COG0568 | eggNOG OG: Sigma70_r2@131567|AQM-18!, Sigma70_r2@33090|NGm-29, Sigma70_r2@58023|PZm-30, Sigma70_r3@131567|C-2!, Sigma70_r4@131567|Bnn-30
- Gene Ontology
- GO:0005515 protein binding; GO:0006352 DNA-templated transcription initiation; GO:0006355 regulation of DNA-templated transcription; GO:0009507 chloroplast; GO:0016987 sigma factor activity; GO:0071461 cellular response to redox state; GO:0071482 cellular response to light stimulus; GO:0080005 photosystem stoichiometry adjustment; GO:2001141 regulation of RNA biosynthetic process
- KEGG
- KO: K03086 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g3882.1
part_ofgenePa01g3882
