West Indian T2T · gene

Pa01g3731

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,881
bp
Pa01:86,430,562–86,432,442
genomic location
Record overview

Feature identity

Identifier
Pa01g3731
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,881 bp
Genomic location
Pa01:86,430,562–86,432,442
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: MYC2 | Seed ortholog: 337451.A0A443P995 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|EiQ-29, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|SF-17!, bHLH-MYC_N@33090|Y-5
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006952 defense response; GO:0009269 response to desiccation; GO:0009611 response to wounding; GO:0009651 response to salt stress; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0009737 response to abscisic acid; GO:0009753 response to jasmonic acid; GO:0009759 indole glucosinolate biosynthetic process; GO:0009963 positive regulation of flavonoid biosynthetic process; GO:0010090 trichome morphogenesis; GO:0010374 stomatal complex development; GO:0019900 kinase binding; GO:0042538 hyperosmotic salinity response; GO:0043425 bHLH transcription factor binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development; GO:0051289 protein homotetramerization; GO:0106167 extracellular ATP signaling; GO:2000068 regulation of defense response to insect; GO:2000652 regulation of secondary cell wall biogenesis
KEGG
KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context

Connected feature records

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