West Indian T2T · gene

Pa01g2585

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,035
bp
Pa01:66,371,615–66,373,649
genomic location
Record overview

Feature identity

Identifier
Pa01g2585
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
2,035 bp
Genomic location
Pa01:66,371,615–66,373,649
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: WRKY41 | Seed ortholog: 337451.A0A443NNY1 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Z-5, WRKY@3398|PE-16
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009507 chloroplast; GO:0009617 response to bacterium; GO:0009751 response to salicylic acid; GO:0010150 leaf senescence; GO:0010193 response to ozone; GO:0031347 regulation of defense response; GO:0033198 response to ATP; GO:0042542 response to hydrogen peroxide; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048527 lateral root development; GO:0071456 cellular response to hypoxia; GO:1900457 regulation of brassinosteroid mediated signaling pathway; GO:2000022 regulation of jasmonic acid mediated signaling pathway; GO:2000070 regulation of response to water deprivation
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.