Feature identity
- Identifier
- PaHa05g13860.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 906 bp
- Genomic location
- 5:47,541,926–47,546,781
- Strand
- −
Hass · mRNA
PaHa05g13860.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 906
- bp
- 5:47,541,926–47,546,781
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g13860
- eggNOG
- Preferred name: LOC103706542 | Seed ortholog: 337451.A0A3S3NNN1 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|BFW-21, HLH@33090|AAF-17, HLH@35493|Aps-20
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K26214 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g13860.1-protein
derives_frommRNAPaHa05g13860.1
mRNAPaHa05g13860.1
part_ofgenePaHa05g13860
CDS
part_ofPaHa05g13860.1-CDS-5-1787993825:47541926..47542027mRNAPaHa05g13860.1
CDS
part_ofPaHa05g13860.1-CDS-5-1787993825:47542288..47542461mRNAPaHa05g13860.1
CDS
part_ofPaHa05g13860.1-CDS-5-1787993825:47542911..47543105mRNAPaHa05g13860.1
CDS
part_ofPaHa05g13860.1-CDS-5-1787993825:47546347..47546781mRNAPaHa05g13860.1
exon
part_ofPaHa05g13860.1-exon-5-1787993825:47541926..47542027mRNAPaHa05g13860.1
exon
part_ofPaHa05g13860.1-exon-5-1787993825:47542288..47542461mRNAPaHa05g13860.1
exon
part_ofPaHa05g13860.1-exon-5-1787993825:47542911..47543105mRNAPaHa05g13860.1
exon
part_ofPaHa05g13860.1-exon-5-1787993825:47546347..47546781mRNAPaHa05g13860.1
