Feature identity
- Identifier
- Pa01g1426
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 4,948 bp
- Genomic location
- Pa01:20,362,843–20,367,790
- Strand
- +
West Indian T2T · gene
Pa01g1426
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,948
- bp
- Pa01:20,362,843–20,367,790
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: NFYA3 | Seed ortholog: 337451.A0A3S3MND3 | COG: S | eggNOG OG: CBFB_NFYA@1437183|DO-14, CBFB_NFYA@2759|A-1, CBFB_NFYA@33090|o-8, CBFB_NFYA@3398|BN-12
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000792 heterochromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001217 DNA-binding transcription repressor activity; GO:0001221 transcription coregulator binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005721 pericentric heterochromatin; GO:0006109 regulation of carbohydrate metabolic process; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006366 transcription by RNA polymerase II; GO:0009888 tissue development; GO:0010468 regulation of gene expression; GO:0016602 CCAAT-binding factor complex; GO:0032993 protein-DNA complex; GO:0043565 sequence-specific DNA binding; GO:0043708 cell adhesion involved in biofilm formation; GO:0045466 R7 cell differentiation; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0060237 regulation of fungal-type cell wall organization; GO:0071280 cellular response to copper ion; GO:0071469 cellular response to alkaline pH; GO:0090575 RNA polymerase II transcription regulator complex; GO:0110039 positive regulation of nematode male tail tip morphogenesis; GO:0140585 promoter-enhancer loop anchoring activity; GO:1900407 regulation of cellular response to oxidative stress; GO:1903715 regulation of aerobic respiration; GO:2000036 regulation of stem cell population maintenance; GO:2000648 positive regulation of stem cell proliferation
- KEGG
- KO: K08064 | Pathway: 04612, 05017, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g1426.1
part_ofgenePa01g1426
