Feature identity
- Identifier
- PaHa05g12680.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 369 bp
- Genomic location
- 5:43,613,843–43,614,686
- Strand
- −
Hass · mRNA
PaHa05g12680.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 369
- bp
- 5:43,613,843–43,614,686
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g12680
- eggNOG
- Preferred name: WRKY15 | Seed ortholog: 337451.A0A3S3Q1M9 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|Aw-8, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|N-4, WRKY@131567|A-1*, WRKY@1437183|Agk-26!, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zR-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus
- KEGG
- KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g12680.1-protein
derives_frommRNAPaHa05g12680.1
mRNAPaHa05g12680.1
part_ofgenePaHa05g12680
CDS
part_ofPaHa05g12680.1-CDS-5-1787993825:43613843..43614125mRNAPaHa05g12680.1
CDS
part_ofPaHa05g12680.1-CDS-5-1787993825:43614601..43614686mRNAPaHa05g12680.1
exon
part_ofPaHa05g12680.1-exon-5-1787993825:43613843..43614125mRNAPaHa05g12680.1
exon
part_ofPaHa05g12680.1-exon-5-1787993825:43614601..43614686mRNAPaHa05g12680.1
