Feature identity
- Identifier
- Pa01g0946
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 10,989 bp
- Genomic location
- Pa01:13,033,952–13,044,940
- Strand
- −
West Indian T2T · gene
Pa01g0946
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 10,989
- bp
- Pa01:13,033,952–13,044,940
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC107904967 | Seed ortholog: 337451.A0A3S3Q5M0 | COG: S | eggNOG OG: TFIIF_beta@1437183|JM-13, TFIIF_beta@2759|A-1, TFIIF_beta_N@1437183|Gs-14, TFIIF_beta_N@2759|A-1
- Gene Ontology
- GO:0000993 RNA polymerase II complex binding; GO:0001096 TFIIF-class transcription factor complex binding; GO:0001174 transcriptional start site selection at RNA polymerase II promoter; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005674 transcription factor TFIIF complex; GO:0005675 transcription factor TFIIH holo complex; GO:0006355 regulation of DNA-templated transcription; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0006368 transcription elongation by RNA polymerase II; GO:0008150 biological_process; GO:0015630 microtubule cytoskeleton; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0051123 RNA polymerase II preinitiation complex assembly
- KEGG
- KO: K03139 | Pathway: 03022 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g0946.1
part_ofgenePa01g0946
