Feature identity
- Identifier
- PaHa05g12320.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 672 bp
- Genomic location
- 5:41,979,138–41,981,047
- Strand
- +
Hass · mRNA
PaHa05g12320.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 672
- bp
- 5:41,979,138–41,981,047
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g12320
- eggNOG
- Preferred name: ATHB-51 | Seed ortholog: 4432.A0A1U8BE84 | COG: S | eggNOG OG: HALZ@131567|X-6, HALZ@3193|AV-10, Homeodomain@131567|XU-17, Homeodomain@1437183|KGU-34, Homeodomain@2759|ACU-20!, Homeodomain@3193|EZV-29, Homeodomain@3398|FTw-30, Homeodomain@35493|BwQ-25
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009965 leaf morphogenesis; GO:0010434 bract formation; GO:0010582 floral meristem determinacy; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048510 regulation of timing of transition from vegetative to reproductive phase
- KEGG
- KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g12320.1-protein
derives_frommRNAPaHa05g12320.1
mRNAPaHa05g12320.1
part_ofgenePaHa05g12320
CDS
part_ofPaHa05g12320.1-CDS-5-1787993825:41979138..41979189mRNAPaHa05g12320.1
CDS
part_ofPaHa05g12320.1-CDS-5-1787993825:41979275..41979606mRNAPaHa05g12320.1
CDS
part_ofPaHa05g12320.1-CDS-5-1787993825:41980760..41981047mRNAPaHa05g12320.1
exon
part_ofPaHa05g12320.1-exon-5-1787993825:41979138..41979189mRNAPaHa05g12320.1
exon
part_ofPaHa05g12320.1-exon-5-1787993825:41979275..41979606mRNAPaHa05g12320.1
exon
part_ofPaHa05g12320.1-exon-5-1787993825:41980760..41981047mRNAPaHa05g12320.1
