Feature identity
- Identifier
- Pa01g0552
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,004 bp
- Genomic location
- Pa01:7,118,993–7,120,996
- Strand
- +
West Indian T2T · gene
Pa01g0552
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,004
- bp
- Pa01:7,118,993–7,120,996
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104594906 | Seed ortholog: 337451.A0A3S3M843 | COG: S | eggNOG OG: Ank_2@131567|B-2, Ank_2@2759|HJ-10!, Ank_2@58023|AWS-15, zf-CCCH_4@131567|A-1*, zf-CCCH_4@2759|AB-6
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009651 response to salt stress; GO:0050832 defense response to fungus; GO:0071456 cellular response to hypoxia
- KEGG
- EC: ec:2.3.2.27 | KO: K23047 | Pathway: 00563, 01100, 01522, 03015, 03440, 04068, 04144, 04320, 04330, 04361, 04371, 04658, 04919, 05020, 05165, 05200, 05206, 05207, 05224 | BRITE: 00001, 01000, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g0552.1
part_ofgenePa01g0552
