Feature identity
- Identifier
- Pa01g0050
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 4,043 bp
- Genomic location
- Pa01:710,532–714,574
- Strand
- +
West Indian T2T · gene
Pa01g0050
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,043
- bp
- Pa01:710,532–714,574
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104597283 | Seed ortholog: 337451.A0A443NIR3 | COG: S | eggNOG OG: HLH@131567|BWE-22, HLH@3398|DaR-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0046982 protein heterodimerization activity
- KEGG
- KO: K09114, K09115 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa01g0050.1
part_ofgenePa01g0050
