Feature identity
- Identifier
- PaHa05g08710.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 744 bp
- Genomic location
- 5:19,612,793–19,613,764
- Strand
- −
Hass · mRNA
PaHa05g08710.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 744
- bp
- 5:19,612,793–19,613,764
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g08710
- eggNOG
- Preferred name: LOC104589418 | Seed ortholog: 337451.A0A3S3MH65 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UUF-51, Myb_DNA-binding@35493|KPq-43
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0009800 cinnamic acid biosynthetic process; GO:1990641 response to iron ion starvation
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g08710.1-protein
derives_frommRNAPaHa05g08710.1
mRNAPaHa05g08710.1
part_ofgenePaHa05g08710
CDS
part_ofPaHa05g08710.1-CDS-5-1787993825:19612793..19613273mRNAPaHa05g08710.1
CDS
part_ofPaHa05g08710.1-CDS-5-1787993825:19613366..19613495mRNAPaHa05g08710.1
CDS
part_ofPaHa05g08710.1-CDS-5-1787993825:19613632..19613764mRNAPaHa05g08710.1
exon
part_ofPaHa05g08710.1-exon-5-1787993825:19612793..19613273mRNAPaHa05g08710.1
exon
part_ofPaHa05g08710.1-exon-5-1787993825:19613366..19613495mRNAPaHa05g08710.1
exon
part_ofPaHa05g08710.1-exon-5-1787993825:19613632..19613764mRNAPaHa05g08710.1
