Hass · polypeptide

PaHa_c159g00250.1-protein

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

192
aa
unplaced_contig_159:20,605–21,180
genomic location
Record overview

Feature identity

Identifier
PaHa_c159g00250.1-protein
Feature type
polypeptide
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
192 aa
Genomic location
unplaced_contig_159:20,605–21,180
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: AREA | Seed ortholog: 37992.A0A4Z0YLJ0 | COG: S | eggNOG OG: DUF1752@131567|A-1*, DUF1752@2759|Z-5, GATA@131567|A-1*, GATA@2759|UK-15, GATA@4751|BeL-24
Gene Ontology
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006338 chromatin remodeling; GO:0006808 regulation of nitrogen utilization; GO:0008270 zinc ion binding; GO:0010468 regulation of gene expression; GO:0031138 negative regulation of conjugation with cellular fusion; GO:0032153 cell division site; GO:0043565 sequence-specific DNA binding; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:1900081 regulation of arginine catabolic process
KEGG
EC: ec:2.7.11.22 | KO: K09184 | Pathway: 03082, 03250, 04022, 04218, 04530, 04658, 04659, 04919, 04928, 05321 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.