Feature identity
- Identifier
- PaHa05g07500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,629 bp
- Genomic location
- 5:14,717,292–14,742,073
- Strand
- +
Hass · mRNA
PaHa05g07500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,629
- bp
- 5:14,717,292–14,742,073
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g07500
- eggNOG
- Preferred name: B'ETA | Seed ortholog: 337451.A0A443NZ11 | COG: S | eggNOG OG: B56@131567|A-1*, B56@1437183|ah-28, B56@2759|C-2!, B56@33090|NF-22, B56@3398|SP-25
- Gene Ontology
- GO:0000398 mRNA splicing, via spliceosome; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0032000 positive regulation of fatty acid beta-oxidation; GO:0034605 cellular response to heat; GO:1900458 negative regulation of brassinosteroid mediated signaling pathway
- KEGG
- EC: ec:2.1.1.297 | KO: K11584 | Pathway: 03015 | BRITE: 00001, 01009, 03019, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g07500.1-protein
derives_frommRNAPaHa05g07500.1
mRNAPaHa05g07500.1
part_ofgenePaHa05g07500
CDS
part_ofPaHa05g07500.1-CDS-5-1787993825:14717292..14717296mRNAPaHa05g07500.1
CDS
part_ofPaHa05g07500.1-CDS-5-1787993825:14717439..14717542mRNAPaHa05g07500.1
CDS
part_ofPaHa05g07500.1-CDS-5-1787993825:14717965..14718598mRNAPaHa05g07500.1
CDS
part_ofPaHa05g07500.1-CDS-5-1787993825:14718668..14719193mRNAPaHa05g07500.1
CDS
part_ofPaHa05g07500.1-CDS-5-1787993825:14741714..14742073mRNAPaHa05g07500.1
exon
part_ofPaHa05g07500.1-exon-5-1787993825:14717292..14717296mRNAPaHa05g07500.1
exon
part_ofPaHa05g07500.1-exon-5-1787993825:14717439..14717542mRNAPaHa05g07500.1
exon
part_ofPaHa05g07500.1-exon-5-1787993825:14717965..14718598mRNAPaHa05g07500.1
exon
part_ofPaHa05g07500.1-exon-5-1787993825:14718668..14719193mRNAPaHa05g07500.1
exon
part_ofPaHa05g07500.1-exon-5-1787993825:14741714..14742073mRNAPaHa05g07500.1
