Feature identity
- Identifier
- PaHa05g06520.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 849 bp
- Genomic location
- 5:12,217,715–12,224,666
- Strand
- +
Hass · mRNA
PaHa05g06520.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 849
- bp
- 5:12,217,715–12,224,666
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g06520
- eggNOG
- Preferred name: LOC104605218 | Seed ortholog: 337451.A0A3S3NPC8 | COG: S | eggNOG OG: UNK.M0O3@131567|A-1*, UNK.M0O3@3398|Z-5, UNK.M0O3@58023|C-2
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009739 response to gibberellin
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g06520.1-protein
derives_frommRNAPaHa05g06520.1
mRNAPaHa05g06520.1
part_ofgenePaHa05g06520
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12217715..12217919mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12218313..12218370mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12218650..12218812mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12223165..12223281mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12223570..12223635mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12223758..12223823mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12223969..12224016mRNAPaHa05g06520.1
CDS
part_ofPaHa05g06520.1-CDS-5-1787993825:12224541..12224666mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12217715..12217919mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12218313..12218370mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12218650..12218812mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12223165..12223281mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12223570..12223635mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12223758..12223823mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12223969..12224016mRNAPaHa05g06520.1
exon
part_ofPaHa05g06520.1-exon-5-1787993825:12224541..12224666mRNAPaHa05g06520.1
