Feature identity
- Identifier
- PaHa05g06000.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,766 bp
- Genomic location
- 5:11,153,789–11,166,187
- Strand
- +
Hass · mRNA
PaHa05g06000.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,766
- bp
- 5:11,153,789–11,166,187
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g06000
- eggNOG
- Preferred name: NLP8 | Seed ortholog: 337451.A0A3S3P629 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@2759|Al-8!, PB1@3193|sQ-22, RWP-RK@131567|Fy-13, RWP-RK@33090|ag-25
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g06000.1-protein
derives_frommRNAPaHa05g06000.1
mRNAPaHa05g06000.1
part_ofgenePaHa05g06000
CDS
part_ofPaHa05g06000.1-CDS-5-1787993825:11153789..11154667mRNAPaHa05g06000.1
CDS
part_ofPaHa05g06000.1-CDS-5-1787993825:11161499..11161540mRNAPaHa05g06000.1
CDS
part_ofPaHa05g06000.1-CDS-5-1787993825:11161671..11162417mRNAPaHa05g06000.1
CDS
part_ofPaHa05g06000.1-CDS-5-1787993825:11164630..11164750mRNAPaHa05g06000.1
CDS
part_ofPaHa05g06000.1-CDS-5-1787993825:11165106..11165449mRNAPaHa05g06000.1
CDS
part_ofPaHa05g06000.1-CDS-5-1787993825:11165555..11166187mRNAPaHa05g06000.1
exon
part_ofPaHa05g06000.1-exon-5-1787993825:11153789..11154667mRNAPaHa05g06000.1
exon
part_ofPaHa05g06000.1-exon-5-1787993825:11161499..11161540mRNAPaHa05g06000.1
exon
part_ofPaHa05g06000.1-exon-5-1787993825:11161671..11162417mRNAPaHa05g06000.1
exon
part_ofPaHa05g06000.1-exon-5-1787993825:11164630..11164750mRNAPaHa05g06000.1
exon
part_ofPaHa05g06000.1-exon-5-1787993825:11165106..11165449mRNAPaHa05g06000.1
exon
part_ofPaHa05g06000.1-exon-5-1787993825:11165555..11166187mRNAPaHa05g06000.1
