Feature identity
- Identifier
- PaHa05g05090.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,306 bp
- Genomic location
- 5:9,317,151–9,341,720
- Strand
- −
Hass · mRNA
PaHa05g05090.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,306
- bp
- 5:9,317,151–9,341,720
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g05090
- eggNOG
- Preferred name: REV | Seed ortholog: 337451.A0A443Q0W7 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|BAJ-23, MEKHLA@131567|A-1, MEKHLA@35493|b-6, START@131567|e-5, START@2759|CL-9, START@3398|Ms-14, START@35493|JK-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009956 radial pattern formation; GO:0010014 meristem initiation; GO:0010051 xylem and phloem pattern formation; GO:0010089 xylem development; GO:0030154 cell differentiation
- KEGG
- KO: K09338 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g05090.1-protein
derives_frommRNAPaHa05g05090.1
mRNAPaHa05g05090.1
part_ofgenePaHa05g05090
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9317151..9317445mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9318585..9318774mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9318887..9318924mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9320461..9320683mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9323800..9323893mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9325134..9325214mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9325420..9325569mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9325720..9325825mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9326928..9327253mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9329897..9330031mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9331865..9331945mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9336181..9336369mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9337309..9337492mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9337591..9337697mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9338020..9338094mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9338172..9338327mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9338618..9338701mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9338825..9338938mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9339255..9339350mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9339555..9339645mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9339750..9339841mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9340365..9340524mRNAPaHa05g05090.1
CDS
part_ofPaHa05g05090.1-CDS-5-1787993825:9341482..9341720mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9317151..9317445mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9318585..9318774mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9318887..9318924mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9320461..9320683mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9323800..9323893mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9325134..9325214mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9325420..9325569mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9325720..9325825mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9326928..9327253mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9329897..9330031mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9331865..9331945mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9336181..9336369mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9337309..9337492mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9337591..9337697mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9338020..9338094mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9338172..9338327mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9338618..9338701mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9338825..9338938mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9339255..9339350mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9339555..9339645mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9339750..9339841mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9340365..9340524mRNAPaHa05g05090.1
exon
part_ofPaHa05g05090.1-exon-5-1787993825:9341482..9341720mRNAPaHa05g05090.1
