Feature identity
- Identifier
- PaHa05g05070.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,950 bp
- Genomic location
- 5:9,257,325–9,261,820
- Strand
- +
Hass · mRNA
PaHa05g05070.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,950
- bp
- 5:9,257,325–9,261,820
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g05070
- eggNOG
- Preferred name: ARF18 | Seed ortholog: 337451.A0A443NZR4 | COG: S | eggNOG OG: Auxin_resp@131221|AX-8, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3398|Gd-14, B3@131221|AHw-20, B3@131567|A-1*, B3@3193|BOp-25, B3@33090|Id-12, B3@3398|CGu-29
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007389 pattern specification process; GO:0009734 auxin-activated signaling pathway; GO:0009738 abscisic acid-activated signaling pathway; GO:0009743 response to carbohydrate; GO:0010154 fruit development; GO:0031540 regulation of anthocyanin biosynthetic process; GO:0035198 miRNA binding; GO:0048366 leaf development; GO:0048441 petal development; GO:0048442 sepal development; GO:0048589 developmental growth; GO:0048829 root cap development; GO:0051301 cell division
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g05070.1-protein
derives_frommRNAPaHa05g05070.1
mRNAPaHa05g05070.1
part_ofgenePaHa05g05070
CDS
part_ofPaHa05g05070.1-CDS-5-1787993825:9257325..9258449mRNAPaHa05g05070.1
CDS
part_ofPaHa05g05070.1-CDS-5-1787993825:9260256..9260526mRNAPaHa05g05070.1
CDS
part_ofPaHa05g05070.1-CDS-5-1787993825:9260692..9261148mRNAPaHa05g05070.1
CDS
part_ofPaHa05g05070.1-CDS-5-1787993825:9261512..9261577mRNAPaHa05g05070.1
CDS
part_ofPaHa05g05070.1-CDS-5-1787993825:9261790..9261820mRNAPaHa05g05070.1
exon
part_ofPaHa05g05070.1-exon-5-1787993825:9257325..9258449mRNAPaHa05g05070.1
exon
part_ofPaHa05g05070.1-exon-5-1787993825:9260256..9260526mRNAPaHa05g05070.1
exon
part_ofPaHa05g05070.1-exon-5-1787993825:9260692..9261148mRNAPaHa05g05070.1
exon
part_ofPaHa05g05070.1-exon-5-1787993825:9261512..9261577mRNAPaHa05g05070.1
exon
part_ofPaHa05g05070.1-exon-5-1787993825:9261790..9261820mRNAPaHa05g05070.1
