Feature identity
- Identifier
- PaHa05g04850.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 885 bp
- Genomic location
- 5:8,381,974–8,390,374
- Strand
- −
Hass · mRNA
PaHa05g04850.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 885
- bp
- 5:8,381,974–8,390,374
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g04850
- eggNOG
- Preferred name: CJD1 | Seed ortholog: 337451.A0A443NZK8 | eggNOG OG: CPP1-like@131567|B-2
- Gene Ontology
- GO:0005515 protein binding; GO:0005576 extracellular region; GO:0006631 fatty acid metabolic process; GO:0009507 chloroplast; GO:0009941 chloroplast envelope; GO:0031969 chloroplast membrane
- KEGG
- EC: ec:2.7.7.7 | KO: K02327 | Pathway: 03030, 03410, 03420, 03430, 03440 | BRITE: 00001, 01000, 01612, 03032, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g04850.1-protein
derives_frommRNAPaHa05g04850.1
mRNAPaHa05g04850.1
part_ofgenePaHa05g04850
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8381974..8382036mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8382198..8382269mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8383007..8383102mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8383291..8383416mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8384596..8384653mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8387736..8387791mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8388741..8388818mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8389086..8389190mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8389306..8389426mRNAPaHa05g04850.1
CDS
part_ofPaHa05g04850.1-CDS-5-1787993825:8390265..8390374mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8381974..8382036mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8382198..8382269mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8383007..8383102mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8383291..8383416mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8384596..8384653mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8387736..8387791mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8388741..8388818mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8389086..8389190mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8389306..8389426mRNAPaHa05g04850.1
exon
part_ofPaHa05g04850.1-exon-5-1787993825:8390265..8390374mRNAPaHa05g04850.1
