Feature identity
- Identifier
- PaHa05g03050.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,353 bp
- Genomic location
- 5:4,851,679–4,858,640
- Strand
- +
Hass · mRNA
PaHa05g03050.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,353
- bp
- 5:4,851,679–4,858,640
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g03050
- eggNOG
- Preferred name: PED1 | Seed ortholog: 337451.A0A3S3RBF8 | COG: COG0183 | eggNOG OG: Thiolase_C@131567|Tu-17, Thiolase_C@3398|GFJ-34, Thiolase_N@131567|Mj-14, Thiolase_N@3398|ILG-32
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0003988 acetyl-CoA C-acyltransferase activity; GO:0005515 protein binding; GO:0005730 nucleolus; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0006635 fatty acid beta-oxidation; GO:0009507 chloroplast; GO:0009514 glyoxysome; GO:0009611 response to wounding; GO:0009695 jasmonic acid biosynthetic process; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0010111 glyoxysome organization
- KEGG
- EC: ec:2.3.1.16 | KO: K07513 | Pathway: 00071, 00280, 00592, 01040, 01100, 01110, 01212, 04146 | Module: M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g03050.1-protein
derives_frommRNAPaHa05g03050.1
mRNAPaHa05g03050.1
part_ofgenePaHa05g03050
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4851679..4851765mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4852968..4853044mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4853542..4853626mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4853804..4853930mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4854020..4854118mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4854227..4854294mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4854387..4854494mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4854577..4854654mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4854783..4854915mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4855074..4855170mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4855644..4855767mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4855876..4855984mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4858397..4858480mRNAPaHa05g03050.1
CDS
part_ofPaHa05g03050.1-CDS-5-1787993825:4858564..4858640mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4851679..4851765mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4852968..4853044mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4853542..4853626mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4853804..4853930mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4854020..4854118mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4854227..4854294mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4854387..4854494mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4854577..4854654mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4854783..4854915mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4855074..4855170mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4855644..4855767mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4855876..4855984mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4858397..4858480mRNAPaHa05g03050.1
exon
part_ofPaHa05g03050.1-exon-5-1787993825:4858564..4858640mRNAPaHa05g03050.1
