Feature identity
- Identifier
- PaHa05g02600.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,599 bp
- Genomic location
- 5:4,209,554–4,212,202
- Strand
- +
Hass · mRNA
PaHa05g02600.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,599
- bp
- 5:4,209,554–4,212,202
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g02600
- eggNOG
- Preferred name: WRKY6 | Seed ortholog: 337451.A0A3S3R9I4 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Ea-12, WRKY@3193|Uq-17, WRKY@3398|Ats-27, WRKY@35493|In-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0016036 cellular response to phosphate starvation; GO:0045892 negative regulation of DNA-templated transcription; GO:0080169 cellular response to boron-containing substance deprivation; GO:1900057 positive regulation of leaf senescence
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g02600.1-protein
derives_frommRNAPaHa05g02600.1
mRNAPaHa05g02600.1
part_ofgenePaHa05g02600
CDS
part_ofPaHa05g02600.1-CDS-5-1787993825:4209554..4209745mRNAPaHa05g02600.1
CDS
part_ofPaHa05g02600.1-CDS-5-1787993825:4209841..4209933mRNAPaHa05g02600.1
CDS
part_ofPaHa05g02600.1-CDS-5-1787993825:4210244..4210405mRNAPaHa05g02600.1
CDS
part_ofPaHa05g02600.1-CDS-5-1787993825:4210526..4210915mRNAPaHa05g02600.1
CDS
part_ofPaHa05g02600.1-CDS-5-1787993825:4211333..4211446mRNAPaHa05g02600.1
CDS
part_ofPaHa05g02600.1-CDS-5-1787993825:4211555..4212202mRNAPaHa05g02600.1
exon
part_ofPaHa05g02600.1-exon-5-1787993825:4209554..4209745mRNAPaHa05g02600.1
exon
part_ofPaHa05g02600.1-exon-5-1787993825:4209841..4209933mRNAPaHa05g02600.1
exon
part_ofPaHa05g02600.1-exon-5-1787993825:4210244..4210405mRNAPaHa05g02600.1
exon
part_ofPaHa05g02600.1-exon-5-1787993825:4210526..4210915mRNAPaHa05g02600.1
exon
part_ofPaHa05g02600.1-exon-5-1787993825:4211333..4211446mRNAPaHa05g02600.1
exon
part_ofPaHa05g02600.1-exon-5-1787993825:4211555..4212202mRNAPaHa05g02600.1
