Feature identity
- Identifier
- PaHa05g01820.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 597 bp
- Genomic location
- 5:2,982,597–2,984,241
- Strand
- +
Hass · mRNA
PaHa05g01820.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 597
- bp
- 5:2,982,597–2,984,241
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g01820
- eggNOG
- Preferred name: BHLH162 | Seed ortholog: 337451.A0A3S3R9N1 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|CXu-25, HLH@3193|Apu-20, HLH@33090|AAF-17, HLH@3398|BVE-22, HLH@35493|AbE-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0050832 defense response to fungus
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g01820.1-protein
derives_frommRNAPaHa05g01820.1
mRNAPaHa05g01820.1
part_ofgenePaHa05g01820
CDS
part_ofPaHa05g01820.1-CDS-5-1787993825:2982597..2982770mRNAPaHa05g01820.1
CDS
part_ofPaHa05g01820.1-CDS-5-1787993825:2983689..2984024mRNAPaHa05g01820.1
CDS
part_ofPaHa05g01820.1-CDS-5-1787993825:2984155..2984241mRNAPaHa05g01820.1
exon
part_ofPaHa05g01820.1-exon-5-1787993825:2982597..2982770mRNAPaHa05g01820.1
exon
part_ofPaHa05g01820.1-exon-5-1787993825:2983689..2984024mRNAPaHa05g01820.1
exon
part_ofPaHa05g01820.1-exon-5-1787993825:2984155..2984241mRNAPaHa05g01820.1
