Feature identity
- Identifier
- PaHa05g00710.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,061 bp
- Genomic location
- 5:1,248,551–1,255,730
- Strand
- −
Hass · mRNA
PaHa05g00710.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,061
- bp
- 5:1,248,551–1,255,730
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g00710
- eggNOG
- Preferred name: LOC110799465 | Seed ortholog: 337451.A0A443Q3A0 | COG: COG1960 | eggNOG OG: ACOX@131567|C-2, Acyl-CoA_dh_1@131567|aD-15, Acyl-CoA_dh_M@131567|B-2
- Gene Ontology
- GO:0003997 acyl-CoA oxidase activity; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006635 fatty acid beta-oxidation; GO:0051791 medium-chain fatty acid metabolic process
- KEGG
- EC: ec:1.3.3.6 | KO: K00232 | Pathway: 00071, 00410, 00592, 00640, 01040, 01100, 01110, 01200, 01212, 04146 | Module: M00013, M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g00710.1-protein
derives_frommRNAPaHa05g00710.1
mRNAPaHa05g00710.1
part_ofgenePaHa05g00710
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1248551..1248793mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1250784..1250882mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1250987..1251091mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1251170..1251316mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1251394..1251513mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1251607..1251742mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1252183..1252313mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1252424..1252498mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1252702..1252801mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1252930..1253102mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1253248..1253355mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1253450..1253567mRNAPaHa05g00710.1
CDS
part_ofPaHa05g00710.1-CDS-5-1787993825:1255225..1255730mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1248551..1248793mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1250784..1250882mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1250987..1251091mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1251170..1251316mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1251394..1251513mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1251607..1251742mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1252183..1252313mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1252424..1252498mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1252702..1252801mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1252930..1253102mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1253248..1253355mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1253450..1253567mRNAPaHa05g00710.1
exon
part_ofPaHa05g00710.1-exon-5-1787993825:1255225..1255730mRNAPaHa05g00710.1
