Hass · mRNA

PaHa04g23390.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,801
bp
4:57,450,437–57,471,367
genomic location
Record overview

Feature identity

Identifier
PaHa04g23390.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
6,801 bp
Genomic location
4:57,450,437–57,471,367
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ACC1 | Seed ortholog: 337451.A0A3S3PG34 | COG: COG4799 | eggNOG OG: ACC_central@131567|A-1, Biotin_carb_C@131567|AV-11, Biotin_carb_N@131567|B-2, Biotin_lipoyl@131567|d-5, CPSase_L_D2@131567|MR-17, Carboxyl_trans@131567|IX-13
Gene Ontology
GO:0003989 acetyl-CoA carboxylase activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009507 chloroplast; GO:0009735 response to cytokinin; GO:0009793 embryo development ending in seed dormancy; GO:0009933 meristem structural organization; GO:0010072 primary shoot apical meristem specification; GO:0030497 fatty acid elongation; GO:0048364 root development; GO:0048367 shoot system development
KEGG
EC: ec:2.1.3.15, ec:6.3.4.14, ec:6.4.1.2 | KO: K11262 | Pathway: 00061, 00620, 00640, 01100, 01110, 01212 | Module: M00082, M00874 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa04g23390.1-CDS-4-1787993825:57450437..57450784
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CDSPaHa04g23390.1-CDS-4-1787993825:57451355..57451561
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CDSPaHa04g23390.1-CDS-4-1787993825:57451655..57451816
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CDSPaHa04g23390.1-CDS-4-1787993825:57452718..57452810
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CDSPaHa04g23390.1-CDS-4-1787993825:57453485..57453580
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CDSPaHa04g23390.1-CDS-4-1787993825:57453785..57453958
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CDSPaHa04g23390.1-CDS-4-1787993825:57455349..57455442
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57455572..57455759
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57455856..57455906
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CDSPaHa04g23390.1-CDS-4-1787993825:57456116..57456155
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57456237..57456361
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CDSPaHa04g23390.1-CDS-4-1787993825:57456467..57456583
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57456713..57456787
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CDSPaHa04g23390.1-CDS-4-1787993825:57456889..57456945
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CDSPaHa04g23390.1-CDS-4-1787993825:57457048..57457152
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CDSPaHa04g23390.1-CDS-4-1787993825:57457529..57457615
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CDSPaHa04g23390.1-CDS-4-1787993825:57459132..57459323
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CDSPaHa04g23390.1-CDS-4-1787993825:57460009..57460197
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CDSPaHa04g23390.1-CDS-4-1787993825:57460326..57460436
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CDSPaHa04g23390.1-CDS-4-1787993825:57460550..57460639
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57460746..57460922
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57461139..57461216
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57461340..57461462
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CDSPaHa04g23390.1-CDS-4-1787993825:57463422..57463691
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57464151..57464506
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57465626..57465863
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57465967..57466316
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57466405..57466618
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57467307..57467486
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57467918..57470074
part_of
CDSPaHa04g23390.1-CDS-4-1787993825:57471311..57471367
part_of
exonPaHa04g23390.1-exon-4-1787993825:57450437..57450784
part_of
exonPaHa04g23390.1-exon-4-1787993825:57451355..57451561
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exonPaHa04g23390.1-exon-4-1787993825:57451655..57451816
part_of
exonPaHa04g23390.1-exon-4-1787993825:57452718..57452810
part_of
exonPaHa04g23390.1-exon-4-1787993825:57453485..57453580
part_of
exonPaHa04g23390.1-exon-4-1787993825:57453785..57453958
part_of
exonPaHa04g23390.1-exon-4-1787993825:57455349..57455442
part_of
exonPaHa04g23390.1-exon-4-1787993825:57455572..57455759
part_of
exonPaHa04g23390.1-exon-4-1787993825:57455856..57455906
part_of
exonPaHa04g23390.1-exon-4-1787993825:57456116..57456155
part_of
exonPaHa04g23390.1-exon-4-1787993825:57456237..57456361
part_of
exonPaHa04g23390.1-exon-4-1787993825:57456467..57456583
part_of
exonPaHa04g23390.1-exon-4-1787993825:57456713..57456787
part_of
exonPaHa04g23390.1-exon-4-1787993825:57456889..57456945
part_of
exonPaHa04g23390.1-exon-4-1787993825:57457048..57457152
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exonPaHa04g23390.1-exon-4-1787993825:57457529..57457615
part_of
exonPaHa04g23390.1-exon-4-1787993825:57459132..57459323
part_of
exonPaHa04g23390.1-exon-4-1787993825:57460009..57460197
part_of
exonPaHa04g23390.1-exon-4-1787993825:57460326..57460436
part_of
exonPaHa04g23390.1-exon-4-1787993825:57460550..57460639
part_of
exonPaHa04g23390.1-exon-4-1787993825:57460746..57460922
part_of
exonPaHa04g23390.1-exon-4-1787993825:57461139..57461216
part_of
exonPaHa04g23390.1-exon-4-1787993825:57461340..57461462
part_of
exonPaHa04g23390.1-exon-4-1787993825:57463422..57463691
part_of
exonPaHa04g23390.1-exon-4-1787993825:57464151..57464506
part_of
exonPaHa04g23390.1-exon-4-1787993825:57465626..57465863
part_of
exonPaHa04g23390.1-exon-4-1787993825:57465967..57466316
part_of
exonPaHa04g23390.1-exon-4-1787993825:57466405..57466618
part_of
exonPaHa04g23390.1-exon-4-1787993825:57467307..57467486
part_of
exonPaHa04g23390.1-exon-4-1787993825:57467918..57470074
part_of
exonPaHa04g23390.1-exon-4-1787993825:57471311..57471367
part_of