Feature identity
- Identifier
- PaHa04g23000.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,067 bp
- Genomic location
- 4:57,019,102–57,024,477
- Strand
- +
Hass · mRNA
PaHa04g23000.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,067
- bp
- 4:57,019,102–57,024,477
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g23000
- eggNOG
- Preferred name: ACX2 | Seed ortholog: 337451.A0A443PGJ7 | COG: COG1960 | eggNOG OG: ACOX@131567|C-2, Acyl-CoA_dh_1@131567|aD-15, Acyl-CoA_dh_M@131567|B-2
- Gene Ontology
- GO:0001676 long-chain fatty acid metabolic process; GO:0003997 acyl-CoA oxidase activity; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0006635 fatty acid beta-oxidation
- KEGG
- EC: ec:1.3.3.6 | KO: K00232 | Pathway: 00071, 00410, 00592, 00640, 01040, 01100, 01110, 01200, 01212, 04146 | Module: M00013, M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g23000.1-protein
derives_frommRNAPaHa04g23000.1
mRNAPaHa04g23000.1
part_ofgenePaHa04g23000
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57019102..57019547mRNAPaHa04g23000.1
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57021264..57021379mRNAPaHa04g23000.1
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57021837..57022717mRNAPaHa04g23000.1
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57023169..57023348mRNAPaHa04g23000.1
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57023454..57023617mRNAPaHa04g23000.1
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57023690..57023813mRNAPaHa04g23000.1
CDS
part_ofPaHa04g23000.1-CDS-4-1787993825:57024322..57024477mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57019102..57019547mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57021264..57021379mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57021837..57022717mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57023169..57023348mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57023454..57023617mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57023690..57023813mRNAPaHa04g23000.1
exon
part_ofPaHa04g23000.1-exon-4-1787993825:57024322..57024477mRNAPaHa04g23000.1
