Feature identity
- Identifier
- PaHa04g21110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 375 bp
- Genomic location
- 4:54,398,097–54,398,756
- Strand
- +
Hass · mRNA
PaHa04g21110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 375
- bp
- 4:54,398,097–54,398,756
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g21110
- eggNOG
- Preferred name: LOC108979542 | Seed ortholog: 337451.A0A443PH62 | COG: COG3255 | eggNOG OG: SCP2@131567|OC-14, SCP2@2759|ly-18
- Gene Ontology
- GO:0003674 molecular_function; GO:0005777 peroxisome; GO:0006635 fatty acid beta-oxidation; GO:0009507 chloroplast; GO:0009646 response to absence of light; GO:0009744 response to sucrose; GO:0009845 seed germination; GO:0032365 intracellular lipid transport; GO:0046487 glyoxylate metabolic process; GO:0048317 seed morphogenesis
- KEGG
- EC: ec:4.2.1.107, ec:4.2.1.119 | KO: K12405, K14729 | Pathway: 00120, 00410, 00640, 01040, 01100, 01200, 01212, 04146 | Module: M00013, M00104, M00861, M00862 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g21110.1-protein
derives_frommRNAPaHa04g21110.1
mRNAPaHa04g21110.1
part_ofgenePaHa04g21110
CDS
part_ofPaHa04g21110.1-CDS-4-1787993825:54398097..54398225mRNAPaHa04g21110.1
CDS
part_ofPaHa04g21110.1-CDS-4-1787993825:54398338..54398398mRNAPaHa04g21110.1
CDS
part_ofPaHa04g21110.1-CDS-4-1787993825:54398464..54398566mRNAPaHa04g21110.1
CDS
part_ofPaHa04g21110.1-CDS-4-1787993825:54398675..54398756mRNAPaHa04g21110.1
exon
part_ofPaHa04g21110.1-exon-4-1787993825:54398097..54398225mRNAPaHa04g21110.1
exon
part_ofPaHa04g21110.1-exon-4-1787993825:54398338..54398398mRNAPaHa04g21110.1
exon
part_ofPaHa04g21110.1-exon-4-1787993825:54398464..54398566mRNAPaHa04g21110.1
exon
part_ofPaHa04g21110.1-exon-4-1787993825:54398675..54398756mRNAPaHa04g21110.1
