Feature identity
- Identifier
- PaHa04g19690.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,217 bp
- Genomic location
- 4:52,291,690–52,298,961
- Strand
- −
Hass · mRNA
PaHa04g19690.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,217
- bp
- 4:52,291,690–52,298,961
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g19690
- eggNOG
- Preferred name: LOC109011131 | Seed ortholog: 337451.A0A3S4PGQ4 | COG: S | eggNOG OG: Anticodon_3@131567|A-1, Anticodon_3@3398|CEH-35, tRNA-synt_1g@131567|AT-7, tRNA-synt_1g@1437183|ERB-36, tRNA_bind@131567|h-6
- Gene Ontology
- GO:0002181 cytoplasmic translation; GO:0004825 methionine-tRNA ligase activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006418 tRNA aminoacylation for protein translation; GO:0006424 glutamyl-tRNA aminoacylation; GO:0006431 methionyl-tRNA aminoacylation; GO:0008270 zinc ion binding; GO:0009303 rRNA transcription; GO:0036120 cellular response to platelet-derived growth factor stimulus; GO:0050667 homocysteine metabolic process; GO:0071364 cellular response to epidermal growth factor stimulus; GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I; GO:1990825 sequence-specific mRNA binding
- KEGG
- EC: ec:6.1.1.10 | KO: K01874 | Pathway: 00450, 00970, 01100 | BRITE: 00001, 01000, 01007, 01613, 03016
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g19690.1-protein
derives_frommRNAPaHa04g19690.1
mRNAPaHa04g19690.1
part_ofgenePaHa04g19690
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52291690..52291743mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52292538..52292633mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52292736..52292968mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52293604..52293724mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52293916..52294059mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52294175..52294303mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52294417..52294482mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52294633..52294751mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52295708..52295822mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52295936..52296042mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52296294..52296384mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52296696..52296839mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52297190..52297420mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52297592..52297747mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52297950..52298103mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52298611..52298755mRNAPaHa04g19690.1
CDS
part_ofPaHa04g19690.1-CDS-4-1787993825:52298850..52298961mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52291690..52291743mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52292538..52292633mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52292736..52292968mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52293604..52293724mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52293916..52294059mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52294175..52294303mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52294417..52294482mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52294633..52294751mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52295708..52295822mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52295936..52296042mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52296294..52296384mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52296696..52296839mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52297190..52297420mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52297592..52297747mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52297950..52298103mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52298611..52298755mRNAPaHa04g19690.1
exon
part_ofPaHa04g19690.1-exon-4-1787993825:52298850..52298961mRNAPaHa04g19690.1
