Feature identity
- Identifier
- PaHa04g18070.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 744 bp
- Genomic location
- 4:49,981,347–49,996,240
- Strand
- −
Hass · mRNA
PaHa04g18070.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 744
- bp
- 4:49,981,347–49,996,240
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g18070
- eggNOG
- Preferred name: AG2 | Seed ortholog: 337451.A0A3S3QTR5 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BXL-27, SRF-TF@35493|jY-20
- Gene Ontology
- GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010214 seed coat development; GO:0046983 protein dimerization activity; GO:0048316 seed development; GO:0048440 carpel development; GO:0048481 plant ovule development; GO:0051302 regulation of cell division; GO:0071669 plant-type cell wall organization or biogenesis; GO:0080060 integument development; GO:0080155 regulation of double fertilization forming a zygote and endosperm; GO:0090376 seed trichome differentiation; GO:0090397 stigma papilla
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g18070.1-protein
derives_frommRNAPaHa04g18070.1
mRNAPaHa04g18070.1
part_ofgenePaHa04g18070
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49981347..49981350mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49983596..49983744mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49984832..49984873mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49984964..49985005mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49986933..49987032mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49988313..49988374mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49988653..49988734mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49994806..49994897mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49994978..49995043mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49995986..49996030mRNAPaHa04g18070.1
CDS
part_ofPaHa04g18070.1-CDS-4-1787993825:49996181..49996240mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49981347..49981350mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49983596..49983744mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49984832..49984873mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49984964..49985005mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49986933..49987032mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49988313..49988374mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49988653..49988734mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49994806..49994897mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49994978..49995043mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49995986..49996030mRNAPaHa04g18070.1
exon
part_ofPaHa04g18070.1-exon-4-1787993825:49996181..49996240mRNAPaHa04g18070.1
