Feature identity
- Identifier
- PaHa04g15990.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,610 bp
- Genomic location
- 4:47,493,442–47,506,117
- Strand
- −
Hass · mRNA
PaHa04g15990.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,610
- bp
- 4:47,493,442–47,506,117
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g15990
- eggNOG
- Preferred name: ARF12 | Seed ortholog: 337451.A0A443PI93 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aet-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Ch-11, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BOY-25
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009908 flower development; GO:0010154 fruit development
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g15990.1-protein
derives_frommRNAPaHa04g15990.1
mRNAPaHa04g15990.1
part_ofgenePaHa04g15990
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47493442..47493541mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47493863..47493942mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47494311..47494340mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47494453..47494501mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47495408..47495598mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47495675..47496678mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47498866..47499013mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47501092..47501167mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47501435..47501557mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47501648..47501812mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47501911..47502001mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47505037..47505121mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47505199..47505354mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47505434..47505490mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47505600..47505698mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47505789..47505901mRNAPaHa04g15990.1
CDS
part_ofPaHa04g15990.1-CDS-4-1787993825:47506075..47506117mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47493442..47493541mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47493863..47493942mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47494311..47494340mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47494453..47494501mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47495408..47495598mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47495675..47496678mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47498866..47499013mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47501092..47501167mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47501435..47501557mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47501648..47501812mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47501911..47502001mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47505037..47505121mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47505199..47505354mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47505434..47505490mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47505600..47505698mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47505789..47505901mRNAPaHa04g15990.1
exon
part_ofPaHa04g15990.1-exon-4-1787993825:47506075..47506117mRNAPaHa04g15990.1
