Feature identity
- Identifier
- PaHa04g15670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,764 bp
- Genomic location
- 4:46,943,558–46,945,321
- Strand
- −
Hass · mRNA
PaHa04g15670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,764
- bp
- 4:46,943,558–46,945,321
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g15670
- eggNOG
- Preferred name: AAE11 | Seed ortholog: 337451.A0A443PIA9 | COG: COG0318 | eggNOG OG: AMP-binding_C@131567|Bpv-25, AMP-binding_C@3398|OkL-43, AMP-binding|C5X7HY@131567, AMP-binding|C5X7HY@3398, AMP-binding|C5X7HY@35493, AMP-binding|C5X7HY@58023
- Gene Ontology
- GO:0003674 molecular_function; GO:0005777 peroxisome; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0018858 benzoate-CoA ligase activity; GO:0019605 butyrate metabolic process; GO:0019761 glucosinolate biosynthetic process; GO:0031956 medium-chain fatty acid-CoA ligase activity
- KEGG
- EC: ec:6.2.1.2, ec:6.2.1.25 | KO: K23108, K23618 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g15670.1-protein
derives_frommRNAPaHa04g15670.1
mRNAPaHa04g15670.1
part_ofgenePaHa04g15670
CDS
part_ofPaHa04g15670.1-CDS-4-1787993825:46943558..46945321mRNAPaHa04g15670.1
exon
part_ofPaHa04g15670.1-exon-4-1787993825:46943558..46945321mRNAPaHa04g15670.1
