Feature identity
- Identifier
- PaHa02g07560.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,674 bp
- Genomic location
- 2:12,017,297–12,021,435
- Strand
- +
Hass · mRNA
PaHa02g07560.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,674
- bp
- 2:12,017,297–12,021,435
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g07560
- eggNOG
- Preferred name: CCD8B | Seed ortholog: 337451.A0A3S3PS30 | COG: S | eggNOG OG: RPE65@131567|B-2, RPE65@3193|Bg-8
- Gene Ontology
- GO:0009507 chloroplast; GO:0010223 secondary shoot formation; GO:0016121 carotene catabolic process; GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:1901601 strigolactone biosynthetic process
- KEGG
- EC: ec:1.13.11.69, ec:1.13.11.70 | KO: K17913 | Pathway: 00906, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g07560.1-protein
derives_frommRNAPaHa02g07560.1
mRNAPaHa02g07560.1
part_ofgenePaHa02g07560
CDS
part_ofPaHa02g07560.1-CDS-2-1787993825:12017297..12017593mRNAPaHa02g07560.1
CDS
part_ofPaHa02g07560.1-CDS-2-1787993825:12018606..12019349mRNAPaHa02g07560.1
CDS
part_ofPaHa02g07560.1-CDS-2-1787993825:12019892..12020085mRNAPaHa02g07560.1
CDS
part_ofPaHa02g07560.1-CDS-2-1787993825:12020435..12020624mRNAPaHa02g07560.1
CDS
part_ofPaHa02g07560.1-CDS-2-1787993825:12021052..12021154mRNAPaHa02g07560.1
CDS
part_ofPaHa02g07560.1-CDS-2-1787993825:12021290..12021435mRNAPaHa02g07560.1
exon
part_ofPaHa02g07560.1-exon-2-1787993825:12017297..12017593mRNAPaHa02g07560.1
exon
part_ofPaHa02g07560.1-exon-2-1787993825:12018606..12019349mRNAPaHa02g07560.1
exon
part_ofPaHa02g07560.1-exon-2-1787993825:12019892..12020085mRNAPaHa02g07560.1
exon
part_ofPaHa02g07560.1-exon-2-1787993825:12020435..12020624mRNAPaHa02g07560.1
exon
part_ofPaHa02g07560.1-exon-2-1787993825:12021052..12021154mRNAPaHa02g07560.1
exon
part_ofPaHa02g07560.1-exon-2-1787993825:12021290..12021435mRNAPaHa02g07560.1
