Feature identity
- Identifier
- PaHa04g13880.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,635 bp
- Genomic location
- 4:42,939,939–42,948,907
- Strand
- −
Hass · mRNA
PaHa04g13880.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,635
- bp
- 4:42,939,939–42,948,907
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g13880
- eggNOG
- Preferred name: Bp10 | Seed ortholog: 337451.A0A443PIP8 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@1437183|FPK-28, Cu-oxidase@2759|v-6, Cu-oxidase@3193|ALV-18, Cu-oxidase@3398|Auh-20, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@1437183|AcN-22, Cu-oxidase_2@2759|B-2!, Cu-oxidase_2@3193|EO-11, Cu-oxidase_2@3398|LS-14, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@1437183|Cyf-26, Cu-oxidase_3@3193|Wt-16, Cu-oxidase_3@3398|wc-19
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0048046 apoplast; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane; GO:0099503 secretory vesicle
- KEGG
- EC: ec:1.10.3.2, ec:1.10.3.3 | KO: K00423, K05909 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g13880.1-protein
derives_frommRNAPaHa04g13880.1
mRNAPaHa04g13880.1
part_ofgenePaHa04g13880
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42939939..42940151mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42941173..42941251mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42941600..42941965mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42942647..42942992mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42943747..42943849mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42945532..42945802mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42948475..42948584mRNAPaHa04g13880.1
CDS
part_ofPaHa04g13880.1-CDS-4-1787993825:42948761..42948907mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42939939..42940151mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42941173..42941251mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42941600..42941965mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42942647..42942992mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42943747..42943849mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42945532..42945802mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42948475..42948584mRNAPaHa04g13880.1
exon
part_ofPaHa04g13880.1-exon-4-1787993825:42948761..42948907mRNAPaHa04g13880.1
