Feature identity
- Identifier
- PaHa04g13190.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 669 bp
- Genomic location
- 4:41,678,752–41,686,642
- Strand
- +
Hass · mRNA
PaHa04g13190.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 669
- bp
- 4:41,678,752–41,686,642
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g13190
- eggNOG
- Preferred name: BnaA09g11250D | Seed ortholog: 337451.A0A443PIV7 | COG: S | eggNOG OG: Methyltransf_16@131567|DZ-12, Methyltransf_16@2759|Ga-14
- Gene Ontology
- GO:0001939 female pronucleus; GO:0001940 male pronucleus; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0031072 heat shock protein binding; GO:0032991 protein-containing complex; GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity; GO:0035642 histone H3R17 methyltransferase activity; GO:0042054 histone methyltransferase activity; GO:0044725 epigenetic programming in the zygotic pronuclei; GO:0044727 epigenetic programing of male pronucleus; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0050890 cognition; GO:0140297 DNA-binding transcription factor binding
- KEGG
- EC: ec:2.7.1.59 | KO: K23151 | Pathway: 00520, 01100, 01250 | BRITE: 00001, 03110
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g13190.1-protein
derives_frommRNAPaHa04g13190.1
mRNAPaHa04g13190.1
part_ofgenePaHa04g13190
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41678752..41678889mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41682128..41682232mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41683849..41683935mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41685752..41685802mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41685888..41685981mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41686071..41686155mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41686254..41686281mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41686402..41686450mRNAPaHa04g13190.1
CDS
part_ofPaHa04g13190.1-CDS-4-1787993825:41686611..41686642mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41678752..41678889mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41682128..41682232mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41683849..41683935mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41685752..41685802mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41685888..41685981mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41686071..41686155mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41686254..41686281mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41686402..41686450mRNAPaHa04g13190.1
exon
part_ofPaHa04g13190.1-exon-4-1787993825:41686611..41686642mRNAPaHa04g13190.1
