Feature identity
- Identifier
- PaHa01g13790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 840 bp
- Genomic location
- 1:22,077,822–22,079,715
- Strand
- +
Hass · mRNA
PaHa01g13790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 840
- bp
- 1:22,077,822–22,079,715
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g13790
- eggNOG
- Preferred name: LOC107908226 | Seed ortholog: 337451.A0A3S3NGZ9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|JLw-42
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g13790.1-protein
derives_frommRNAPaHa01g13790.1
mRNAPaHa01g13790.1
part_ofgenePaHa01g13790
CDS
part_ofPaHa01g13790.1-CDS-1-1787993825:22077822..22077954mRNAPaHa01g13790.1
CDS
part_ofPaHa01g13790.1-CDS-1-1787993825:22078068..22078197mRNAPaHa01g13790.1
CDS
part_ofPaHa01g13790.1-CDS-1-1787993825:22079139..22079715mRNAPaHa01g13790.1
exon
part_ofPaHa01g13790.1-exon-1-1787993825:22077822..22077954mRNAPaHa01g13790.1
exon
part_ofPaHa01g13790.1-exon-1-1787993825:22078068..22078197mRNAPaHa01g13790.1
exon
part_ofPaHa01g13790.1-exon-1-1787993825:22079139..22079715mRNAPaHa01g13790.1
