Feature identity
- Identifier
- PaHa04g10930.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 948 bp
- Genomic location
- 4:36,389,803–36,416,667
- Strand
- −
Hass · mRNA
PaHa04g10930.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 948
- bp
- 4:36,389,803–36,416,667
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g10930
- eggNOG
- Preferred name: TCP2 | Seed ortholog: 337451.A0A3S3Q9D2 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|AO-8, TCP@58023|f-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of photomorphogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g10930.1-protein
derives_frommRNAPaHa04g10930.1
mRNAPaHa04g10930.1
part_ofgenePaHa04g10930
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36389803..36389870mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36394672..36394788mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36402933..36403047mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36403156..36403230mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36405778..36405843mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36406292..36406371mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36410608..36410707mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36411052..36411322mRNAPaHa04g10930.1
CDS
part_ofPaHa04g10930.1-CDS-4-1787993825:36416612..36416667mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36389803..36389870mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36394672..36394788mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36402933..36403047mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36403156..36403230mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36405778..36405843mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36406292..36406371mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36410608..36410707mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36411052..36411322mRNAPaHa04g10930.1
exon
part_ofPaHa04g10930.1-exon-4-1787993825:36416612..36416667mRNAPaHa04g10930.1
