Feature identity
- Identifier
- PaHa04g09450.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,014 bp
- Genomic location
- 4:31,035,726–31,043,611
- Strand
- +
Hass · mRNA
PaHa04g09450.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,014
- bp
- 4:31,035,726–31,043,611
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g09450
- eggNOG
- Preferred name: LOC104593362 | Seed ortholog: 337451.A0A443PJL5 | COG: S | eggNOG OG: Epimerase@131567|KJ-12, Epimerase@3398|Gfs-25
- Gene Ontology
- GO:0009507 chloroplast; GO:0009813 flavonoid biosynthetic process; GO:0009964 negative regulation of flavonoid biosynthetic process; GO:0016491 oxidoreductase activity; GO:0016854 racemase and epimerase activity; GO:0033729 anthocyanidin reductase activity; GO:0043473 pigmentation; GO:0050661 NADP binding
- KEGG
- EC: ec:1.3.1.77 | KO: K08695 | Pathway: 00941, 01100, 01110 | Module: M00039 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g09450.1-protein
derives_frommRNAPaHa04g09450.1
mRNAPaHa04g09450.1
part_ofgenePaHa04g09450
CDS
part_ofPaHa04g09450.1-CDS-4-1787993825:31035726..31035852mRNAPaHa04g09450.1
CDS
part_ofPaHa04g09450.1-CDS-4-1787993825:31037775..31037941mRNAPaHa04g09450.1
CDS
part_ofPaHa04g09450.1-CDS-4-1787993825:31038850..31039050mRNAPaHa04g09450.1
CDS
part_ofPaHa04g09450.1-CDS-4-1787993825:31040300..31040459mRNAPaHa04g09450.1
CDS
part_ofPaHa04g09450.1-CDS-4-1787993825:31041060..31041273mRNAPaHa04g09450.1
CDS
part_ofPaHa04g09450.1-CDS-4-1787993825:31043467..31043611mRNAPaHa04g09450.1
exon
part_ofPaHa04g09450.1-exon-4-1787993825:31035726..31035852mRNAPaHa04g09450.1
exon
part_ofPaHa04g09450.1-exon-4-1787993825:31037775..31037941mRNAPaHa04g09450.1
exon
part_ofPaHa04g09450.1-exon-4-1787993825:31038850..31039050mRNAPaHa04g09450.1
exon
part_ofPaHa04g09450.1-exon-4-1787993825:31040300..31040459mRNAPaHa04g09450.1
exon
part_ofPaHa04g09450.1-exon-4-1787993825:31041060..31041273mRNAPaHa04g09450.1
exon
part_ofPaHa04g09450.1-exon-4-1787993825:31043467..31043611mRNAPaHa04g09450.1
