Feature identity
- Identifier
- PaHa04g08870.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 228 bp
- Genomic location
- 4:27,785,457–27,787,005
- Strand
- −
Hass · mRNA
PaHa04g08870.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 228
- bp
- 4:27,785,457–27,787,005
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g08870
- eggNOG
- Preferred name: LOC109709364 | Seed ortholog: 337451.A0A3S3NBN3 | COG: COG0318 | eggNOG OG: AMP-binding_C@131567|Bpv-25, AMP-binding_C@1437183|VCC-47, AMP-binding|C5X7HY@131567, AMP-binding|C5X7HY@35493
- Gene Ontology
- GO:0003987 acetyl-CoA synthetase activity; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006083 acetate metabolic process; GO:0006097 glyoxylate cycle; GO:0019605 butyrate metabolic process; GO:0031956 medium-chain fatty acid-CoA ligase activity
- KEGG
- EC: ec:6.2.1.1, ec:6.2.1.2 | KO: K01913 | Pathway: 00010, 00620, 00630, 00650, 01100, 01110, 01200 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g08870.1-protein
derives_frommRNAPaHa04g08870.1
mRNAPaHa04g08870.1
part_ofgenePaHa04g08870
CDS
part_ofPaHa04g08870.1-CDS-4-1787993825:27785457..27785623mRNAPaHa04g08870.1
CDS
part_ofPaHa04g08870.1-CDS-4-1787993825:27786945..27787005mRNAPaHa04g08870.1
exon
part_ofPaHa04g08870.1-exon-4-1787993825:27785457..27785623mRNAPaHa04g08870.1
exon
part_ofPaHa04g08870.1-exon-4-1787993825:27786945..27787005mRNAPaHa04g08870.1
