Feature identity
- Identifier
- PaHa04g08620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 717 bp
- Genomic location
- 4:25,299,522–25,301,491
- Strand
- +
Hass · mRNA
PaHa04g08620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 717
- bp
- 4:25,299,522–25,301,491
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g08620
- eggNOG
- Preferred name: LOC104586653 | Seed ortholog: 337451.A0A3S3P4I0 | COG: S | eggNOG OG: Myb_DNA-binding@131221|LYW-44, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|Mih-45, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|QXL-48, Myb_DNA-binding@35493|IIv-41
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g08620.1-protein
derives_frommRNAPaHa04g08620.1
mRNAPaHa04g08620.1
part_ofgenePaHa04g08620
CDS
part_ofPaHa04g08620.1-CDS-4-1787993825:25299522..25299599mRNAPaHa04g08620.1
CDS
part_ofPaHa04g08620.1-CDS-4-1787993825:25300685..25300712mRNAPaHa04g08620.1
CDS
part_ofPaHa04g08620.1-CDS-4-1787993825:25300775..25300814mRNAPaHa04g08620.1
CDS
part_ofPaHa04g08620.1-CDS-4-1787993825:25300921..25301491mRNAPaHa04g08620.1
exon
part_ofPaHa04g08620.1-exon-4-1787993825:25299522..25299599mRNAPaHa04g08620.1
exon
part_ofPaHa04g08620.1-exon-4-1787993825:25300685..25300712mRNAPaHa04g08620.1
exon
part_ofPaHa04g08620.1-exon-4-1787993825:25300775..25300814mRNAPaHa04g08620.1
exon
part_ofPaHa04g08620.1-exon-4-1787993825:25300921..25301491mRNAPaHa04g08620.1
