Feature identity
- Identifier
- PaHa04g05920.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,326 bp
- Genomic location
- 4:13,722,914–13,749,025
- Strand
- −
Hass · mRNA
PaHa04g05920.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,326
- bp
- 4:13,722,914–13,749,025
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g05920
- eggNOG
- Preferred name: LOC110799552 | Seed ortholog: 337451.A0A3S3P1J2 | COG: COG3239 | eggNOG OG: FA_desaturase@131567|Bc-9
- Gene Ontology
- GO:0005886 plasma membrane; GO:0006633 fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009941 chloroplast envelope; GO:0010205 photoinhibition; GO:0019904 protein domain specific binding; GO:0102850 acyl-lipid (n+3)-(Z)-desaturase (ferredoxin) activity
- KEGG
- EC: ec:1.14.19.23, ec:1.14.19.45 | KO: K10255 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g05920.1-protein
derives_frommRNAPaHa04g05920.1
mRNAPaHa04g05920.1
part_ofgenePaHa04g05920
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13722914..13723075mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13723476..13723590mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13740751..13740869mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13741486..13741663mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13741847..13741969mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13742434..13742585mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13742717..13742860mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13742958..13743196mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13748660..13748714mRNAPaHa04g05920.1
CDS
part_ofPaHa04g05920.1-CDS-4-1787993825:13748987..13749025mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13722914..13723075mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13723476..13723590mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13740751..13740869mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13741486..13741663mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13741847..13741969mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13742434..13742585mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13742717..13742860mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13742958..13743196mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13748660..13748714mRNAPaHa04g05920.1
exon
part_ofPaHa04g05920.1-exon-4-1787993825:13748987..13749025mRNAPaHa04g05920.1
