Feature identity
- Identifier
- PaHa04g02980.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,203 bp
- Genomic location
- 4:6,531,193–6,532,522
- Strand
- +
Hass · mRNA
PaHa04g02980.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,203
- bp
- 4:6,531,193–6,532,522
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g02980
- eggNOG
- Preferred name: LOC104599091 | Seed ortholog: 337451.A0A443PKU1 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@2759|Bq-8, CCT@33090|DK-9, CCT@3398|by-17, CCT@35493|MD-13, zf-B_box@2759|B-2!, zf-B_box@35493|Hk-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010099 regulation of photomorphogenesis; GO:0010161 red light signaling pathway; GO:0016607 nuclear speck; GO:0032922 circadian regulation of gene expression; GO:0043565 sequence-specific DNA binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g02980.1-protein
derives_frommRNAPaHa04g02980.1
mRNAPaHa04g02980.1
part_ofgenePaHa04g02980
CDS
part_ofPaHa04g02980.1-CDS-4-1787993825:6531193..6532011mRNAPaHa04g02980.1
CDS
part_ofPaHa04g02980.1-CDS-4-1787993825:6532139..6532522mRNAPaHa04g02980.1
exon
part_ofPaHa04g02980.1-exon-4-1787993825:6531193..6532011mRNAPaHa04g02980.1
exon
part_ofPaHa04g02980.1-exon-4-1787993825:6532139..6532522mRNAPaHa04g02980.1
