Feature identity
- Identifier
- PaHa04g00070.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,548 bp
- Genomic location
- 4:240,219–251,098
- Strand
- +
Hass · mRNA
PaHa04g00070.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,548
- bp
- 4:240,219–251,098
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g00070
- eggNOG
- Preferred name: PHR3 | Seed ortholog: 337451.A0A443PLD7 | COG: S | eggNOG OG: Myb_CC_LHEQLE@131567|A-1*, Myb_CC_LHEQLE@33090|f-9, Myb_CC_LHEQLE@3398|t-10, Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@33090|Bsv-33, Myb_DNA-binding@3398|CRN-34
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- EC: ec:6.3.4.5 | KO: K01940 | Pathway: 00220, 00250, 01100, 01110, 01230 | Module: M00029, M00844, M00845, M00978 | BRITE: 00001, 01000, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g00070.1-protein
derives_frommRNAPaHa04g00070.1
mRNAPaHa04g00070.1
part_ofgenePaHa04g00070
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:240219..240233mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:240906..241021mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:242320..242376mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:243116..243662mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:243764..243974mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:245593..245669mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:246454..246493mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:247337..247409mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:247500..247569mRNAPaHa04g00070.1
CDS
part_ofPaHa04g00070.1-CDS-4-1787993825:250757..251098mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:240219..240233mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:240906..241021mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:242320..242376mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:243116..243662mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:243764..243974mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:245593..245669mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:246454..246493mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:247337..247409mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:247500..247569mRNAPaHa04g00070.1
exon
part_ofPaHa04g00070.1-exon-4-1787993825:250757..251098mRNAPaHa04g00070.1
