Feature identity
- Identifier
- PaHa01g00040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,185 bp
- Genomic location
- 1:139,363–142,003
- Strand
- −
Hass · mRNA
PaHa01g00040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,185
- bp
- 1:139,363–142,003
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g00040
- eggNOG
- Preferred name: MYB28 | Seed ortholog: 337451.A0A443NSP5 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|VlQ-52, Myb_DNA-binding@3193|HJe-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|QZx-48, Myb_DNA-binding@35493|GNw-39
- Gene Ontology
- GO:0000902 cell morphogenesis; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010091 trichome branching; GO:0035017 cuticle pattern formation; GO:1901957 regulation of cutin biosynthetic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g00040.1-protein
derives_frommRNAPaHa01g00040.1
mRNAPaHa01g00040.1
part_ofgenePaHa01g00040
CDS
part_ofPaHa01g00040.1-CDS-1-1787993825:139363..140284mRNAPaHa01g00040.1
CDS
part_ofPaHa01g00040.1-CDS-1-1787993825:141619..141748mRNAPaHa01g00040.1
CDS
part_ofPaHa01g00040.1-CDS-1-1787993825:141871..142003mRNAPaHa01g00040.1
exon
part_ofPaHa01g00040.1-exon-1-1787993825:139363..140284mRNAPaHa01g00040.1
exon
part_ofPaHa01g00040.1-exon-1-1787993825:141619..141748mRNAPaHa01g00040.1
exon
part_ofPaHa01g00040.1-exon-1-1787993825:141871..142003mRNAPaHa01g00040.1
